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  5. Cpa|evm.model.tig00000157.79

Cpa|evm.model.tig00000157.79


Description : Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component


Gene families : OG0004935 (Archaeplastida) Phylogenetic Tree(s): OG0004935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000157.79
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g47650.1 No alias component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.02 Archaeplastida
MA_10431485g0010 No alias component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.02 Archaeplastida
Solyc07g056220.3.1 No alias component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006926 Vps16_N 275 414
IPR006926 Vps16_N 9 112
No external refs found!