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  5. Cpa|evm.model.tig00000158.13

Cpa|evm.model.tig00000158.13


Description : External stimuli response.light.red/far red light.PHY phytochrome photoreceptor


Gene families : OG0000347 (Archaeplastida) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000158.13
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00193460 evm_27.TU.AmTr_v1... Phytohormones.cytokinin.perception and signal... 0.02 Archaeplastida
AT2G01830 ATCRE1, WOL,... CHASE domain containing histidine kinase protein 0.01 Archaeplastida
LOC_Os01g69920.1 No alias receptor protein (AHK) 0.01 Archaeplastida
MA_10430235g0010 No alias receptor protein (AHK) 0.01 Archaeplastida
Pp3c1_20050V3.1 No alias histidine kinase 3 0.02 Archaeplastida
Pp3c21_18040V3.1 No alias histidine kinase 2 0.02 Archaeplastida
Pp3c22_15240V3.1 No alias histidine kinase 3 0.01 Archaeplastida
Pp3c2_20110V3.1 No alias histidine kinase 3 0.03 Archaeplastida
Solyc07g047770.4.1 No alias receptor protein (AHK) 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013767 PAS_fold 413 501
IPR001789 Sig_transdc_resp-reg_receiver 792 918
IPR013515 Phytochrome_cen-reg 200 377
IPR003594 HATPase_C 643 764
IPR008207 Sig_transdc_His_kin_Hpt_dom 1176 1258
No external refs found!