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  5. AT1G67360

AT1G67360


Description : Rubber elongation factor protein (REF)


Gene families : OG0001611 (Archaeplastida) Phylogenetic Tree(s): OG0001611_tree ,
OG_05_0001211 (LandPlants) Phylogenetic Tree(s): OG_05_0001211_tree ,
OG_06_0001008 (SeedPlants) Phylogenetic Tree(s): OG_06_0001008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67360
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010480001 No alias Lipid metabolism.lipid bodies-associated activities.LDAP protein 0.11 Archaeplastida
GSVIVT01031148001 No alias Lipid metabolism.lipid bodies-associated activities.LDAP protein 0.03 Archaeplastida
MA_13880g0010 No alias associated factor (LDAP) 0.02 Archaeplastida
Solyc05g015390.3.1 No alias associated factor (LDAP) 0.12 Archaeplastida
Zm00001e010944_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005782 peroxisomal matrix IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006743 ubiquinone metabolic process IEP Neighborhood
BP GO:0006744 ubiquinone biosynthetic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0006986 response to unfolded protein IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031907 microbody lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034605 cellular response to heat IEP Neighborhood
BP GO:0034620 cellular response to unfolded protein IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035250 UDP-galactosyltransferase activity IEP Neighborhood
BP GO:0035967 cellular response to topologically incorrect protein IEP Neighborhood
BP GO:0036294 cellular response to decreased oxygen levels IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042181 ketone biosynthetic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
BP GO:0042816 vitamin B6 metabolic process IEP Neighborhood
BP GO:0042819 vitamin B6 biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043462 regulation of ATPase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071241 cellular response to inorganic substance IEP Neighborhood
BP GO:0071248 cellular response to metal ion IEP Neighborhood
BP GO:0071277 cellular response to calcium ion IEP Neighborhood
BP GO:0071453 cellular response to oxygen levels IEP Neighborhood
BP GO:0071456 cellular response to hypoxia IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
BP GO:1901661 quinone metabolic process IEP Neighborhood
BP GO:1901663 quinone biosynthetic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR008802 REF 8 207
No external refs found!