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  5. Cpa|evm.model.tig00000194.27

Cpa|evm.model.tig00000194.27


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS28 component


Gene families : OG0003817 (Archaeplastida) Phylogenetic Tree(s): OG0003817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.27
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre12.g510450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
MA_10206328g0010 No alias component RPS28 of SSU proteome 0.01 Archaeplastida
Pp3c14_19610V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.07 Archaeplastida
Pp3c17_13300V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.06 Archaeplastida
Pp3c1_28770V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.01 Archaeplastida
Pp3c6_27040V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.05 Archaeplastida
Smo170205 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 Archaeplastida
Zm00001e000507_P001 No alias component RPS28 of SSU proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000289 Ribosomal_S28e 4 65
No external refs found!