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  5. Cpa|evm.model.tig00000194.52

Cpa|evm.model.tig00000194.52


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF15 component


Gene families : OG0006677 (Archaeplastida) Phylogenetic Tree(s): OG0006677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.52
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00107550 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.06 Archaeplastida
GSVIVT01010206001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
MA_10434282g0010 No alias component TAF15 of TFIId basal transcription regulation complex 0.01 Archaeplastida
Mp8g16600.1 No alias component TAF15 of TFIId basal transcription regulation complex 0.04 Archaeplastida
Pp3c17_960V3.1 No alias TBP-associated factor 15 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 39 117
IPR001876 Znf_RanBP2 211 239
No external refs found!