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  5. Cpa|evm.model.tig00000219.40

Cpa|evm.model.tig00000219.40


Description : Elongator complex protein 1 OS=Arabidopsis thaliana


Gene families : OG0006304 (Archaeplastida) Phylogenetic Tree(s): OG0006304_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000219.40
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT5G13680 ABO1, ELO2 IKI3 family protein 0.02 Archaeplastida
Cre08.g372500 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
MA_10434310g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_9271465g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c8_3890V3.1 No alias IKI3 family protein 0.02 Archaeplastida
Solyc05g054630.4.1 No alias component ELP1 of ELONGATOR transcription elongation complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEA Interproscan
CC GO:0033588 Elongator holoenzyme complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006849 Elp1 707 868
IPR006849 Elp1 56 151
IPR006849 Elp1 166 428
IPR006849 Elp1 526 703
No external refs found!