Cpa|evm.model.tig00000241.158

Description : Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica

Gene families : OG0006655 (Archaeplastida) Phylogenetic Tree(s): OG0006655_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000241.158
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00068p00082940	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation initiation.mRNA...	0.01	Archaeplastida
MA_136385g0010	No alias	Eukaryotic translation initiation factor NCBP OS=Oryza...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001040	TIF_eIF_4E	14	175

External Links

No external refs found!