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  5. Cpa|evm.model.tig00000342.20

Cpa|evm.model.tig00000342.20


Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component


Gene families : OG0003309 (Archaeplastida) Phylogenetic Tree(s): OG0003309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000342.20
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AT3G58560 No alias DNAse I-like superfamily protein 0.01 Archaeplastida
AT3G58580 No alias DNAse I-like superfamily protein 0.02 Archaeplastida
Cre11.g475900 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
GSVIVT01033442001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 Archaeplastida
Gb_27365 No alias deadenylase component CCR4 of CCR4-NOT complex 0.01 Archaeplastida
Pp3c23_22040V3.1 No alias DNAse I-like superfamily protein 0.02 Archaeplastida
Pp3c24_20740V3.1 No alias DNAse I-like superfamily protein 0.02 Archaeplastida
Solyc10g078950.2.1 No alias deadenylase component CCR4 of CCR4-NOT complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR031615 Zfn-C6H2 102 156
IPR005135 Endo/exonuclease/phosphatase 282 397
No external refs found!