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  5. Cpa|evm.model.tig00000342.4

Cpa|evm.model.tig00000342.4


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP1 component


Gene families : OG0001913 (Archaeplastida) Phylogenetic Tree(s): OG0001913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000342.4
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00113490 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AT1G01100 No alias 60S acidic ribosomal protein family 0.02 Archaeplastida
AT4G00810 No alias 60S acidic ribosomal protein family 0.02 Archaeplastida
AT5G47700 No alias 60S acidic ribosomal protein family 0.02 Archaeplastida
Cre17.g738300 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
GSVIVT01019679001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
GSVIVT01027436001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01038637001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
LOC_Os08g02340.1 No alias component RPP1 of LSU proteome component 0.02 Archaeplastida
MA_90134g0010 No alias component RPP1 of LSU proteome component 0.02 Archaeplastida
Mp3g02890.1 No alias component RPP1 of LSU proteome component 0.01 Archaeplastida
Mp6g11950.1 No alias component RPP1 of LSU proteome component 0.02 Archaeplastida
Pp3c17_22190V3.1 No alias 60S acidic ribosomal protein family 0.02 Archaeplastida
Pp3c1_36220V3.1 No alias 60S acidic ribosomal protein family 0.04 Archaeplastida
Pp3c23_18100V3.1 No alias 60S acidic ribosomal protein family 0.01 Archaeplastida
Pp3c8_22380V3.1 No alias 60S acidic ribosomal protein family 0.01 Archaeplastida
Smo133023 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
Solyc01g016470.3.1 No alias component RPP1 of LSU proteome component 0.02 Archaeplastida
Zm00001e029197_P001 No alias component RPP1 of LSU proteome component 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!