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  5. Cpa|evm.model.tig00000402.41

Cpa|evm.model.tig00000402.41


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component


Gene families : OG0002725 (Archaeplastida) Phylogenetic Tree(s): OG0002725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000402.41
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494100 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
GSVIVT01025852001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida
Gb_20157 No alias component SF3B1 of splicing factor 3B complex 0.03 Archaeplastida
LOC_Os02g05310.4 No alias component SF3B1 of splicing factor 3B complex 0.03 Archaeplastida
MA_11685g0010 No alias component SF3B1 of splicing factor 3B complex 0.01 Archaeplastida
Mp5g19650.1 No alias component SF3B1 of splicing factor 3B complex 0.03 Archaeplastida
Pp3c11_14450V3.1 No alias splicing factor, putative 0.05 Archaeplastida
Smo230130 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.01 Archaeplastida
Smo97336 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Zm00001e013644_P003 No alias No annotation 0.02 Archaeplastida
Zm00001e025224_P001 No alias component SF3B1 of splicing factor 3B complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015016 SF3b_su1 251 360
No external refs found!