Cpa|evm.model.tig00000403.40

Description : DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).exonuclease (EXO1)

Gene families : OG0003315 (Archaeplastida) Phylogenetic Tree(s): OG0003315_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000403.40
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00265020	evm_27.TU.AmTr_v1...	DNA damage response.DNA repair mechanisms.homologous...	0.02	Archaeplastida
Cre07.g353950	No alias	DNA damage response.DNA repair mechanisms.homologous...	0.02	Archaeplastida
GSVIVT01008397001	No alias	DNA damage response.DNA repair mechanisms.homologous...	0.04	Archaeplastida
GSVIVT01021316001	No alias	DNA damage response.DNA repair mechanisms.homologous...	0.03	Archaeplastida
Gb_14686	No alias	homologous recombination repair exonuclease (EXO1)	0.02	Archaeplastida
LOC_Os01g56940.1	No alias	homologous recombination repair exonuclease (EXO1)	0.01	Archaeplastida
MA_10431686g0010	No alias	homologous recombination repair exonuclease (EXO1)	0.01	Archaeplastida
Mp5g20790.1	No alias	homologous recombination repair exonuclease (EXO1)	0.01	Archaeplastida
Pp3c23_8000V3.1	No alias	5\-3\ exonuclease family protein	0.02	Archaeplastida
Solyc02g071530.2.1	No alias	homologous recombination repair exonuclease (EXO1)	0.02	Archaeplastida
Solyc03g119070.2.1	No alias	homologous recombination repair exonuclease (EXO1)	0.01	Archaeplastida
Zm00001e019645_P001	No alias	homologous recombination repair exonuclease (EXO1)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006086	XPG-I_dom	141	225
IPR006085	XPG_DNA_repair_N	1	99

External Links

No external refs found!