- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : zinc ion binding
Gene families : OG0004234 (Archaeplastida) Phylogenetic Tree(s): OG0004234_tree ,
OG_05_0007261 (LandPlants) Phylogenetic Tree(s): OG_05_0007261_tree ,
OG_06_0008308 (SeedPlants) Phylogenetic Tree(s): OG_06_0008308_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G70150 | |
| Cluster | HCCA: Cluster_273 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e034977_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Neighborhood |
| BP | GO:0006109 | regulation of carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
| BP | GO:0008284 | positive regulation of cell proliferation | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0009648 | photoperiodism | IEP | Neighborhood |
| BP | GO:0009745 | sucrose mediated signaling | IEP | Neighborhood |
| BP | GO:0009756 | carbohydrate mediated signaling | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010182 | sugar mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016604 | nuclear body | IEP | Neighborhood |
| CC | GO:0016607 | nuclear speck | IEP | Neighborhood |
| BP | GO:0030422 | production of siRNA involved in RNA interference | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0035196 | production of miRNAs involved in gene silencing by miRNA | IEP | Neighborhood |
| BP | GO:0042127 | regulation of cell proliferation | IEP | Neighborhood |
| BP | GO:0043687 | post-translational protein modification | IEP | Neighborhood |
| CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048573 | photoperiodism, flowering | IEP | Neighborhood |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002893 | Znf_MYND | 12 | 45 |
| No external refs found! |