Cpa|evm.model.tig00000473.1

Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana

Gene families : OG0000159 (Archaeplastida) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000473.1
Cluster	HCCA: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00074370	evm_27.TU.AmTr_v1...	RNA processing.RNA splicing.spliceosome...	0.02	Archaeplastida
Gb_14269	No alias	Probable pre-mRNA-splicing factor ATP-dependent RNA...	0.02	Archaeplastida
LOC_Os07g32430.1	No alias	RNA helicase (Prp16)	0.02	Archaeplastida
LOC_Os11g20554.1	No alias	Probable pre-mRNA-splicing factor ATP-dependent RNA...	0.02	Archaeplastida
Mp7g01000.1	No alias	E3 ubiquitin ligase (RBR-Helicase)	0.02	Archaeplastida
Solyc04g014210.3.1	No alias	E3 ubiquitin ligase (RBR-Helicase)	0.02	Archaeplastida
Solyc11g010310.2.1	No alias	E3 ubiquitin ligase (RBR-Helicase)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	100	183
IPR011709	DUF1605	247	323

External Links

No external refs found!