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  5. Cpa|evm.model.tig00000489.11

Cpa|evm.model.tig00000489.11


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36a component


Gene families : OG0002069 (Archaeplastida) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000489.11
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00106300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AMTR_s00077p00123980 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
AT3G23390 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
AT4G14320 No alias Zinc-binding ribosomal protein family protein 0.31 Archaeplastida
Cre06.g310700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01012052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
GSVIVT01032097001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Gb_13148 No alias component RPL36a of LSU proteome component 0.11 Archaeplastida
Gb_34419 No alias component RPL36a of LSU proteome component 0.15 Archaeplastida
LOC_Os07g26740.1 No alias component RPL36a of LSU proteome component 0.07 Archaeplastida
LOC_Os07g33898.1 No alias component RPL36a of LSU proteome component 0.01 Archaeplastida
LOC_Os07g33997.1 No alias component RPL36a of LSU proteome component 0.01 Archaeplastida
MA_10427098g0010 No alias component RPL36a of LSU proteome component 0.02 Archaeplastida
MA_99845g0010 No alias component RPL36a of LSU proteome component 0.24 Archaeplastida
Mp2g25770.1 No alias component RPL36a of LSU proteome component 0.36 Archaeplastida
Pp3c26_11220V3.1 No alias Zinc-binding ribosomal protein family protein 0.26 Archaeplastida
Pp3c2_27320V3.1 No alias Zinc-binding ribosomal protein family protein 0.06 Archaeplastida
Pp3c3_10260V3.1 No alias Zinc-binding ribosomal protein family protein 0.14 Archaeplastida
Pp3c4_27290V3.1 No alias Zinc-binding ribosomal protein family protein 0.07 Archaeplastida
Pp3c7_20120V3.1 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
Smo161986 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Solyc03g112850.3.1 No alias component RPL36a of LSU proteome component 0.06 Archaeplastida
Zm00001e010489_P002 No alias component RPL36a of LSU proteome component 0.37 Archaeplastida
Zm00001e033410_P001 No alias component RPL36a of LSU proteome component 0.13 Archaeplastida
Zm00001e035123_P001 No alias component RPL36a of LSU proteome component 0.23 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 17 92
No external refs found!