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  5. AT1G71020

AT1G71020


Description : ARM repeat superfamily protein


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000670 (LandPlants) Phylogenetic Tree(s): OG_05_0000670_tree ,
OG_06_0001036 (SeedPlants) Phylogenetic Tree(s): OG_06_0001036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71020
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.03 Archaeplastida
GSVIVT01007275001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01011767001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01021265001 No alias U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.02 Archaeplastida
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os01g60860.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g49950.1 No alias E3 ubiquitin ligase (PUB) 0.08 Archaeplastida
LOC_Os05g39930.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c10_4480V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c20_16680V3.1 No alias plant U-box 13 0.02 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g007640.3.1 No alias E3 ubiquitin ligase (PUB) 0.08 Archaeplastida
Solyc09g056450.4.1 No alias U-box domain-containing protein 9 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e014566_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e019429_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e023475_P001 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
MF GO:0009922 fatty acid elongase activity IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022604 regulation of cell morphogenesis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0045298 tubulin complex IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Neighborhood
MF GO:0047513 1,2-alpha-L-fucosidase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048868 pollen tube development IEP Neighborhood
BP GO:0051510 regulation of unidimensional cell growth IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 243 314
IPR000225 Armadillo 373 412
IPR000225 Armadillo 456 494
IPR000225 Armadillo 499 537
No external refs found!