Description : winged-helix DNA-binding transcription factor family protein
Gene families : OG0000491 (Archaeplastida) Phylogenetic Tree(s): OG0000491_tree ,
OG_05_0047826 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042659 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00057p00112340 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H1 linker histone | 0.07 | Archaeplastida | |
Cre13.g567450 | No alias | Chromatin organisation.histones.H1 linker histone | 0.18 | Archaeplastida | |
GSVIVT01028074001 | No alias | Chromatin organisation.histones.H1 linker histone | 0.05 | Archaeplastida | |
Gb_02738 | No alias | linker histone (H1) | 0.12 | Archaeplastida | |
LOC_Os04g18090.1 | No alias | linker histone (H1) | 0.22 | Archaeplastida | |
LOC_Os07g08710.1 | No alias | linker histone (H1) | 0.06 | Archaeplastida | |
MA_102457g0010 | No alias | linker histone (H1) | 0.11 | Archaeplastida | |
MA_10428525g0020 | No alias | linker histone (H1) | 0.05 | Archaeplastida | |
MA_10436125g0020 | No alias | linker histone (H1) | 0.03 | Archaeplastida | |
MA_11137g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_11231g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_500183g0010 | No alias | linker histone (H1) | 0.09 | Archaeplastida | |
MA_5293931g0010 | No alias | No annotation | 0.05 | Archaeplastida | |
MA_6251451g0010 | No alias | No annotation | 0.05 | Archaeplastida | |
Mp6g03150.1 | No alias | linker histone (H1) | 0.08 | Archaeplastida | |
Pp3c18_19330V3.1 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | Archaeplastida | |
Solyc09g066100.3.1 | No alias | linker histone (H1) | 0.05 | Archaeplastida | |
Solyc09g083380.4.1 | No alias | linker histone (H1) | 0.12 | Archaeplastida | |
Zm00001e006018_P006 | No alias | linker histone (H1) | 0.04 | Archaeplastida | |
Zm00001e007189_P001 | No alias | linker histone (H1) | 0.12 | Archaeplastida | |
Zm00001e011857_P001 | No alias | linker histone (H1) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | ISS | Interproscan |
MF | GO:0003677 | DNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006334 | nucleosome assembly | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004067 | asparaginase activity | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
BP | GO:0006516 | glycoprotein catabolic process | IEP | Neighborhood |
BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
BP | GO:0006530 | asparagine catabolic process | IEP | Neighborhood |
BP | GO:0009063 | cellular amino acid catabolic process | IEP | Neighborhood |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009065 | glutamine family amino acid catabolic process | IEP | Neighborhood |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009068 | aspartate family amino acid catabolic process | IEP | Neighborhood |
BP | GO:0009100 | glycoprotein metabolic process | IEP | Neighborhood |
BP | GO:0009292 | genetic transfer | IEP | Neighborhood |
BP | GO:0009294 | DNA mediated transformation | IEP | Neighborhood |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Neighborhood |
BP | GO:0033345 | asparagine catabolic process via L-aspartate | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
BP | GO:0044764 | multi-organism cellular process | IEP | Neighborhood |
BP | GO:0051604 | protein maturation | IEP | Neighborhood |
BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Neighborhood |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 62 | 128 |
No external refs found! |