Cpa|evm.model.tig00000571.29


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UPT6 assembly factor


Gene families : OG0004917 (Archaeplastida) Phylogenetic Tree(s): OG0004917_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000571.29
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT4G28200 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.08 Archaeplastida
Cre10.g442000 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
GSVIVT01012705001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Gb_01417 No alias SSU processome assembly factor (UTP6) 0.01 Archaeplastida
LOC_Os02g01350.1 No alias SSU processome assembly factor (UTP6) 0.1 Archaeplastida
MA_10435952g0010 No alias SSU processome assembly factor (UTP6) 0.05 Archaeplastida
Mp7g18520.1 No alias SSU processome assembly factor (UTP6) 0.11 Archaeplastida
Pp3c5_4450V3.1 No alias No annotation 0.02 Archaeplastida
Solyc02g032920.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e011580_P001 No alias SSU processome assembly factor (UTP6) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA Interproscan
MF GO:0030515 snoRNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013949 Utp6 9 91
No external refs found!