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  5. Cpa|evm.model.tig00000571.7

Cpa|evm.model.tig00000571.7


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000571.7
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00125450 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01009934001 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os03g20870.1 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os07g43740.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_50561g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Smo129201 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc02g089410.3.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.01 Archaeplastida
Zm00001e023806_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 175 218
No external refs found!