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  5. Cpa|evm.model.tig00000572.5

Cpa|evm.model.tig00000572.5


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000572.5
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028256001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Gb_08616 No alias subfamily ABCB transporter 0.01 Archaeplastida
LOC_Os05g04610.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10432169g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10436810g0020 No alias subfamily ABCB transporter 0.01 Archaeplastida
MA_18863g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_293226g0010 No alias No annotation 0.04 Archaeplastida
MA_93218g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003866_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 759 896
IPR003439 ABC_transporter-like 114 259
IPR011527 ABC1_TM_dom 428 714
No external refs found!