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  5. Cpa|evm.model.tig00000605.10

Cpa|evm.model.tig00000605.10


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor


Gene families : OG0004938 (Archaeplastida) Phylogenetic Tree(s): OG0004938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000605.10
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT3G11964 No alias RNA binding;RNA binding 0.07 Archaeplastida
Cre10.g428750 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01033430001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Gb_10495 No alias SSU processome assembly factor (RRP5) 0.04 Archaeplastida
LOC_Os07g10350.1 No alias SSU processome assembly factor (RRP5) 0.06 Archaeplastida
MA_10425804g0010 No alias rRNA biogenesis protein RRP5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10428306g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g12810.1 No alias SSU processome assembly factor (RRP5) 0.06 Archaeplastida
Pp3c4_30330V3.1 No alias RNA binding;RNA binding 0.06 Archaeplastida
Smo148115 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
Solyc03g051900.4.1 No alias SSU processome assembly factor (RRP5) 0.09 Archaeplastida
Zm00001e033067_P004 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003029 S1_domain 854 926
IPR003029 S1_domain 1598 1670
No external refs found!