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  5. Cpa|evm.model.tig00000615.61

Cpa|evm.model.tig00000615.61


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor


Gene families : OG0005051 (Archaeplastida) Phylogenetic Tree(s): OG0005051_tree

Sequence : coding (download), protein (download)

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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.61
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00139120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AT3G16810 APUM24, PUM24 pumilio 24 0.09 Archaeplastida
Cre12.g528950 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01035090001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Gb_02879 No alias APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.01 Archaeplastida
LOC_Os03g61560.1 No alias APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.06 Archaeplastida
Mp7g01710.1 No alias APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.11 Archaeplastida
Pp3c5_10580V3.1 No alias pumilio 24 0.03 Archaeplastida
Solyc01g065580.4.1 No alias APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.1 Archaeplastida
Zm00001e006271_P002 No alias APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012959 CPL_dom 367 490
No external refs found!