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  5. Cpa|evm.model.tig00000615.69

Cpa|evm.model.tig00000615.69


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP0 component


Gene families : OG0002275 (Archaeplastida) Phylogenetic Tree(s): OG0002275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000615.69
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00231170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
AT2G40010 No alias Ribosomal protein L10 family protein 0.01 Archaeplastida
AT3G09200 No alias Ribosomal protein L10 family protein 0.29 Archaeplastida
AT3G11250 No alias Ribosomal protein L10 family protein 0.18 Archaeplastida
Cre12.g520500 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Gb_00059 No alias component RPP0 of LSU proteome component 0.05 Archaeplastida
Gb_29821 No alias 60S acidic ribosomal protein P0 OS=Glycine max... 0.03 Archaeplastida
LOC_Os08g03640.1 No alias component RPP0 of LSU proteome component 0.16 Archaeplastida
LOC_Os11g04070.1 No alias component RPP0 of LSU proteome component 0.01 Archaeplastida
LOC_Os12g03880.1 No alias component RPP0 of LSU proteome component 0.2 Archaeplastida
MA_10433058g0020 No alias component RPP0 of LSU proteome component 0.09 Archaeplastida
Mp1g07120.1 No alias component RPP0 of LSU proteome component 0.42 Archaeplastida
Pp3c11_3700V3.1 No alias Ribosomal protein L10 family protein 0.05 Archaeplastida
Pp3c1_8280V3.1 No alias Ribosomal protein L10 family protein 0.16 Archaeplastida
Smo149765 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Solyc05g054580.3.1 No alias component RPP0 of LSU proteome component 0.25 Archaeplastida
Zm00001e021786_P001 No alias component RPP0 of LSU proteome component 0.35 Archaeplastida
Zm00001e029292_P001 No alias component RPP0 of LSU proteome component 0.32 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 9 102
No external refs found!