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  5. Cpa|evm.model.tig00000754.23

Cpa|evm.model.tig00000754.23


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-D1 component


Gene families : OG0004011 (Archaeplastida) Phylogenetic Tree(s): OG0004011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000754.23
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00127560 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
AT3G07590 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
AT4G02840 No alias Small nuclear ribonucleoprotein family protein 0.01 Archaeplastida
Cre16.g665400 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.07 Archaeplastida
LOC_Os02g37430.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.06 Archaeplastida
Pp3c13_22270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Pp3c5_16280V3.1 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
Pp3c9_610V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Zm00001e007844_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041053_P001 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 5 69
No external refs found!