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  5. AT1G72980

AT1G72980 (LBD7)


Aliases : LBD7

Description : LOB domain-containing protein 7


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0010662 (SeedPlants) Phylogenetic Tree(s): OG_06_0010662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72980
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT1G06280 LBD2 LOB domain-containing protein 2 0.04 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.04 Archaeplastida
AT3G13850 LBD22 LOB domain-containing protein 22 0.05 Archaeplastida
AT3G50510 LBD28 LOB domain-containing protein 28 0.05 Archaeplastida
GSVIVT01018486001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_07877 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os03g41600.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os09g19950.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g069440.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g087570.1.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc03g113360.4.1 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 13 110
No external refs found!