Cpa|evm.model.tig00000789.4

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000789.4
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00027p00144540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.01	Archaeplastida
Gb_20878	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
MA_19453g0040	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
Pp3c17_18130V3.1	No alias	homeobox 1	0.02	Archaeplastida
Zm00001e022379_P002	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	207	262

External Links

No external refs found!