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  5. Cpa|evm.model.tig00000802.67

Cpa|evm.model.tig00000802.67


Description : Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana


Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000802.67
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.66 No alias Probable helicase CHR10 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre07.g325700 No alias ATP-dependent helicase BRM OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01012117001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
GSVIVT01017820001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01017821001 No alias No description available 0.03 Archaeplastida
GSVIVT01017921001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01025216001 No alias Helicase protein MOM1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01026952001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01037235001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Gb_35181 No alias chromatin remodeling factor (Chd1). component CHR5 of... 0.02 Archaeplastida
LOC_Os05g05230.1 No alias chromatin remodeling factor (Snf2) 0.02 Archaeplastida
LOC_Os05g05780.1 No alias chromatin remodeling factor (Iswi) 0.02 Archaeplastida
LOC_Os06g08480.1 No alias chromatin remodeling factor (Chd3/Mi-2) 0.02 Archaeplastida
LOC_Os07g46590.1 No alias chromatin remodeling factor (Chd1). component CHR5 of... 0.01 Archaeplastida
MA_10429361g0010 No alias chromatin remodeling factor (Chd1). component CHR5 of... 0.01 Archaeplastida
MA_10436824g0010 No alias No annotation 0.01 Archaeplastida
MA_137856g0010 No alias chromatin remodeling factor (Snf2) 0.01 Archaeplastida
MA_637555g0010 No alias ATP-dependent helicase BRM OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9572741g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g26680.1 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.01 Archaeplastida
Mp4g00040.1 No alias chromatin remodeling factor (Chd3/Mi-2) 0.03 Archaeplastida
Mp8g17660.1 No alias chromatin remodeling factor (Snf2) 0.01 Archaeplastida
Pp3c10_2280V3.1 No alias chromatin remodeling 4 0.01 Archaeplastida
Pp3c18_19045V3.1 No alias chromatin remodeling factor CHD3 (PICKLE) 0.01 Archaeplastida
Pp3c21_10800V3.1 No alias chromatin remodeling factor CHD3 (PICKLE) 0.02 Archaeplastida
Pp3c27_3890V3.1 No alias Homeotic gene regulator 0.01 Archaeplastida
Pp3c3_23680V3.1 No alias chromatin remodeling 4 0.01 Archaeplastida
Pp3c7_3340V3.1 No alias chromatin-remodeling protein 11 0.03 Archaeplastida
Smo440558 No alias Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e010722_P005 No alias Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e010908_P001 No alias Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e040406_P002 No alias chromatin remodeling factor (Snf2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 914 966
IPR000330 SNF2_N 634 830
No external refs found!