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  5. Cpa|evm.model.tig00000826.24

Cpa|evm.model.tig00000826.24


Description : 40S ribosomal protein S9-1 OS=Arabidopsis thaliana


Gene families : OG0001616 (Archaeplastida) Phylogenetic Tree(s): OG0001616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000826.24
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT5G15200 No alias Ribosomal protein S4 0.06 Archaeplastida
Cre08.g359750 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01008028001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_41315 No alias component RPS9 of SSU proteome 0.04 Archaeplastida
LOC_Os03g05980.1 No alias component RPS9 of SSU proteome 0.07 Archaeplastida
LOC_Os11g38959.1 No alias component RPS9 of SSU proteome 0.04 Archaeplastida
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.03 Archaeplastida
MA_10431745g0020 No alias component RPS9 of SSU proteome 0.02 Archaeplastida
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.06 Archaeplastida
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.05 Archaeplastida
Pp3c12_9190V3.1 No alias Ribosomal protein S4 0.05 Archaeplastida
Pp3c13_19780V3.1 No alias Ribosomal protein S4 0.11 Archaeplastida
Pp3c27_1920V3.1 No alias Ribosomal protein S4 0.02 Archaeplastida
Pp3c3_23720V3.1 No alias Ribosomal protein S4 0.06 Archaeplastida
Pp3c4_15290V3.1 No alias Ribosomal protein S4 0.03 Archaeplastida
Pp3c6_17680V3.1 No alias Ribosomal protein S4 0.03 Archaeplastida
Smo74302 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Solyc01g010540.3.1 No alias component RPS9 of SSU proteome 0.03 Archaeplastida
Solyc01g010580.3.1 No alias component RPS9 of SSU proteome 0.02 Archaeplastida
Solyc04g005680.4.1 No alias component RPS9 of SSU proteome 0.03 Archaeplastida
Solyc05g007250.3.1 No alias component RPS9 of SSU proteome 0.06 Archaeplastida
Zm00001e010819_P002 No alias component RPS9 of SSU proteome 0.05 Archaeplastida
Zm00001e018345_P001 No alias component RPS9 of SSU proteome 0.04 Archaeplastida
Zm00001e037961_P002 No alias component RPS9 of SSU proteome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 18 62
IPR002942 S4_RNA-bd 107 150
No external refs found!