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  5. Cpa|evm.model.tig00000829.24

Cpa|evm.model.tig00000829.24


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component


Gene families : OG0003666 (Archaeplastida) Phylogenetic Tree(s): OG0003666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000829.24
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Cre12.g514450 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
LOC_Os02g58090.1 No alias component SF3B2 of splicing factor 3B complex 0.02 Archaeplastida
Pp3c14_10510V3.1 No alias proline-rich spliceosome-associated (PSP) family protein 0.01 Archaeplastida
Pp3c17_13490V3.1 No alias proline-rich spliceosome-associated (PSP) family protein 0.01 Archaeplastida
Solyc02g078610.4.1 No alias component SF3B2 of splicing factor 3B complex 0.02 Archaeplastida
Solyc03g006520.3.1 No alias component SF3B2 of splicing factor 3B complex 0.03 Archaeplastida
Zm00001e013359_P002 No alias component SF3B2 of splicing factor 3B complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 346 381
IPR007180 DUF382 211 337
No external refs found!