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  5. Cpa|evm.model.tig00000842.28

Cpa|evm.model.tig00000842.28


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS20 component


Gene families : OG0002786 (Archaeplastida) Phylogenetic Tree(s): OG0002786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000842.28
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00105050 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
AT3G45030 No alias Ribosomal protein S10p/S20e family protein 0.37 Archaeplastida
AT3G47370 No alias Ribosomal protein S10p/S20e family protein 0.31 Archaeplastida
AT5G62300 No alias Ribosomal protein S10p/S20e family protein 0.38 Archaeplastida
Cre16.g660150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.28 Archaeplastida
GSVIVT01018553001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
LOC_Os03g14530.1 No alias component RPS20 of SSU proteome 0.17 Archaeplastida
LOC_Os06g04290.1 No alias component RPS20 of SSU proteome 0.25 Archaeplastida
LOC_Os10g08930.1 No alias component RPS20 of SSU proteome 0.23 Archaeplastida
MA_103406g0010 No alias component RPS20 of SSU proteome 0.16 Archaeplastida
MA_10429759g0010 No alias component RPS20 of SSU proteome 0.28 Archaeplastida
Mp2g09440.1 No alias component RPS20 of SSU proteome 0.43 Archaeplastida
Pp3c14_7180V3.1 No alias Ribosomal protein S10p/S20e family protein 0.25 Archaeplastida
Pp3c15_21510V3.1 No alias Ribosomal protein S10p/S20e family protein 0.22 Archaeplastida
Pp3c1_21860V3.1 No alias Ribosomal protein S10p/S20e family protein 0.16 Archaeplastida
Smo115495 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Solyc01g096580.3.1 No alias component RPS20 of SSU proteome 0.24 Archaeplastida
Solyc01g096590.3.1 No alias component RPS20 of SSU proteome 0.22 Archaeplastida
Zm00001e001045_P001 No alias component RPS20 of SSU proteome 0.25 Archaeplastida
Zm00001e036579_P001 No alias component RPS20 of SSU proteome 0.31 Archaeplastida
Zm00001e038574_P001 No alias component RPS20 of SSU proteome 0.33 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 21 115
No external refs found!