Cpa|evm.model.tig00000857.20

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SR30/34 splicing factor

Gene families : OG0001375 (Archaeplastida) Phylogenetic Tree(s): OG0001375_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000857.20
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
AT1G02840	At-SR34, SRP34,...	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Archaeplastida
Cre06.g278239	No alias	RNA processing.RNA splicing.spliceosome-associated...	0.03	Archaeplastida
GSVIVT01038636001	No alias	RNA processing.RNA splicing.spliceosome-associated...	0.02	Archaeplastida
Gb_24206	No alias	SR30/34 RNA splicing factor	0.02	Archaeplastida
LOC_Os01g21420.1	No alias	SR30/34 RNA splicing factor	0.02	Archaeplastida
MA_11621g0010	No alias	SR30/34 RNA splicing factor	0.02	Archaeplastida
Zm00001e038219_P006	No alias	SR30/34 RNA splicing factor	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	109	164
IPR000504	RRM_dom	15	57

External Links

No external refs found!