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  5. Cpa|evm.model.tig00000880.19

Cpa|evm.model.tig00000880.19


Description : Protein STABILIZED1 OS=Arabidopsis thaliana


Gene families : OG0003244 (Archaeplastida) Phylogenetic Tree(s): OG0003244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000880.19
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT4G03430 STA1, EMB2770 pre-mRNA splicing factor-related 0.02 Archaeplastida
Cre14.g633650 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
LOC_Os10g35550.1 No alias protein factor PRPF6/PRP1/STA1 of U5 small nuclear... 0.02 Archaeplastida
Mp6g10790.1 No alias protein factor PRPF6/PRP1/STA1 of U5 small nuclear... 0.04 Archaeplastida
Solyc07g054200.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010491 PRP1_N 18 49
IPR010491 PRP1_N 74 221
No external refs found!