Cpa|evm.model.tig00000880.24


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit


Gene families : OG0002576 (Archaeplastida) Phylogenetic Tree(s): OG0002576_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000880.24
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00180870 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Gb_34393 No alias large subunit of TFIIa basal transcription factor complex 0.01 Archaeplastida
Gb_40230 No alias large subunit of TFIIa basal transcription factor complex 0.01 Archaeplastida
MA_216190g0010 No alias large subunit of TFIIa basal transcription factor complex 0.01 Archaeplastida
Zm00001e026772_P001 No alias large subunit of TFIIa basal transcription factor complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005672 transcription factor TFIIA complex IEA Interproscan
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004855 TFIIA_asu/bsu 8 53
IPR004855 TFIIA_asu/bsu 86 271
No external refs found!