AT1G74230 (GR-RBP5)


Aliases : GR-RBP5

Description : glycine-rich RNA-binding protein 5


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000394 (LandPlants) Phylogenetic Tree(s): OG_05_0000394_tree ,
OG_06_0000412 (SeedPlants) Phylogenetic Tree(s): OG_06_0000412_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G74230
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00030p00132070 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00114p00125610 evm_27.TU.AmTr_v1... Small RNA-binding protein 11, chloroplastic... 0.01 Archaeplastida
AMTR_s00154p00024620 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Archaeplastida
GSVIVT01021024001 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
Gb_26296 No alias RNA editing factor (ORRM) 0.06 Archaeplastida
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.08 Archaeplastida
LOC_Os03g46770.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
LOC_Os10g17454.1 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
MA_168323g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Pp3c12_23410V3.1 No alias glycine-rich RNA-binding protein 3 0.02 Archaeplastida
Pp3c12_23420V3.1 No alias glycine-rich RNA-binding protein 3 0.03 Archaeplastida
Pp3c7_3360V3.1 No alias cold, circadian rhythm, and RNA binding 1 0.1 Archaeplastida
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.06 Archaeplastida
Solyc02g066930.3.1 No alias RNA editing factor (ORRM) 0.03 Archaeplastida
Solyc10g081180.2.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.03 Archaeplastida
Solyc11g008210.3.1 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e028481_P002 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 Archaeplastida
Zm00001e033010_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IDA Interproscan
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0005507 copper ion binding IDA Interproscan
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
BP GO:0032392 DNA geometric change IEP Neighborhood
BP GO:0032508 DNA duplex unwinding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 105
No external refs found!