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Description : Chromatin organisation.histones.H2B-type histone
Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000944.18 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00228620 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| AMTR_s00012p00088340 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| AMTR_s00085p00145460 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| AT1G07790 | HTB1 | Histone superfamily protein | 0.03 | Archaeplastida | |
| AT2G37470 | No alias | Histone superfamily protein | 0.01 | Archaeplastida | |
| AT3G09480 | No alias | Histone superfamily protein | 0.01 | Archaeplastida | |
| AT3G45980 | HTB9, H2B | Histone superfamily protein | 0.03 | Archaeplastida | |
| AT3G46030 | HTB11 | Histone superfamily protein | 0.01 | Archaeplastida | |
| AT5G22880 | HTB2, H2B | histone B2 | 0.03 | Archaeplastida | |
| AT5G59910 | HTB4 | Histone superfamily protein | 0.03 | Archaeplastida | |
| Cre06.g264900 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre06.g276550 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre13.g570050 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre17.g709150 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre17.g710450 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre17.g711750 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre17.g713450 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Cre17.g714050 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| GSVIVT01025025001 | No alias | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
| Gb_12082 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
| Gb_12096 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| Gb_26315 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Gb_32754 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| Gb_41491 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| LOC_Os01g05630.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| LOC_Os01g05900.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
| LOC_Os01g06010.1 | No alias | histone (H2B) | 0.1 | Archaeplastida | |
| LOC_Os03g17084.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| LOC_Os05g49860.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| LOC_Os08g38300.1 | No alias | histone (H2B) | 0.06 | Archaeplastida | |
| MA_10436516g0020 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
| MA_6078786g0010 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| MA_9293473g0010 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| Mp4g13450.1 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| Mp6g04070.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
| Pp3c17_15750V3.1 | No alias | Histone superfamily protein | 0.02 | Archaeplastida | |
| Solyc02g038690.1.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Solyc03g071620.2.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Solyc05g055440.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
| Solyc06g074790.2.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Solyc06g075800.1.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
| Solyc11g007920.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
| Solyc11g007930.1.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Solyc11g066430.2.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Zm00001e004028_P001 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Zm00001e009857_P001 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
| Zm00001e010906_P002 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
| Zm00001e019346_P001 | No alias | histone (H2B) | 0.05 | Archaeplastida | |
| Zm00001e020484_P002 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| Zm00001e023342_P001 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Zm00001e027803_P001 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
| Zm00001e028779_P003 | No alias | histone (H2B) | 0.05 | Archaeplastida | |
| Zm00001e034226_P001 | No alias | histone (H2B) | 0.05 | Archaeplastida | |
| Zm00001e038466_P001 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
| Zm00001e039057_P002 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
| Zm00001e041296_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | Interproscan |
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 8 | 105 |
| No external refs found! |