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  5. Cpa|evm.model.tig00000944.22

Cpa|evm.model.tig00000944.22


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component


Gene families : OG0002997 (Archaeplastida) Phylogenetic Tree(s): OG0002997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000944.22
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G77180 SKIP chromatin protein family 0.02 Archaeplastida
Cre01.g051100 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
GSVIVT01015321001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
MA_47699g0020 No alias component SKIP/MAC6 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Mp5g03870.1 No alias component SKIP/MAC6 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Pp3c12_6510V3.1 No alias chromatin protein family 0.05 Archaeplastida
Solyc11g017220.1.1 No alias component SKIP/MAC6 of non-snRNP MOS4-associated complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
CC GO:0005681 spliceosomal complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004015 SKI-int_prot_SKIP_SNW-dom 295 454
No external refs found!