Cpa|evm.model.tig00000944.9

Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor

Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000944.9
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method
AT1G22130	AGL104	AGAMOUS-like 104	0.02	Archaeplastida
AT1G77980	AGL66	AGAMOUS-like 66	0.01	Archaeplastida
Gb_12581	No alias	transcription factor (MADS/AGL)	0.01	Archaeplastida
Gb_12778	No alias	transcription factor (MADS/AGL)	0.01	Archaeplastida
LOC_Os08g38590.1	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida
Pp3c4_3820V3.1	No alias	AGAMOUS-like 66	0.02	Archaeplastida
Solyc01g106700.3.1	No alias	transcription factor (MADS/AGL)	0.01	Archaeplastida
Solyc05g051825.1.1	No alias	transcription factor (MADS/AGL)	0.01	Archaeplastida
Zm00001e029170_P001	No alias	transcription factor (MADS/AGL)	0.01	Archaeplastida
Zm00001e036127_P002	No alias	transcription factor (MADS/AGL)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!