1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000949.17

Cpa|evm.model.tig00000949.17


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit


Gene families : OG0004927 (Archaeplastida) Phylogenetic Tree(s): OG0004927_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000949.17
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00265330 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Mp3g10960.1 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.01 Archaeplastida
Smo416209 No alias General transcription and DNA repair factor IIH helicase... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032438 ERCC3_RAD25_C 586 817
IPR006935 Helicase/UvrB_N 405 559
No external refs found!