AT1G74500 (ATBS1, TMO7, BS1)

Aliases : ATBS1, TMO7, BS1

Description : activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1

Gene families : OG0003672 (Archaeplastida) Phylogenetic Tree(s): OG0003672_tree ,
OG_05_0002548 (LandPlants) Phylogenetic Tree(s): OG_05_0002548_tree ,
OG_06_0001410 (SeedPlants) Phylogenetic Tree(s): OG_06_0001410_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G74500
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AT1G26945	KDR	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	Archaeplastida
AT3G28857	No alias	basic helix-loop-helix (bHLH) DNA-binding family protein	0.04	Archaeplastida
AT5G15160	BNQ2, BHLH134	BANQUO 2	0.05	Archaeplastida
AT5G39860	PRE1, BNQ1, BHLH136	basic helix-loop-helix (bHLH) DNA-binding family protein	0.05	Archaeplastida
GSVIVT01011380001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	Archaeplastida
LOC_Os03g07540.1	No alias	transcription factor (bHLH)	0.04	Archaeplastida
MA_148495g0010	No alias	transcription factor (bHLH)	0.05	Archaeplastida
MA_156285g0010	No alias	transcription factor (bHLH)	0.05	Archaeplastida
MA_9119217g0010	No alias	transcription factor (bHLH)	0.05	Archaeplastida
Solyc03g112995.1.1	No alias	transcription factor (bHLH)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009742	brassinosteroid mediated signaling pathway	IGI	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010015	root morphogenesis	None	Extended
BP	GO:0010086	embryonic root morphogenesis	IMP	Interproscan
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043401	steroid hormone mediated signaling pathway	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	IEP	Interproscan
BP	GO:0048598	embryonic morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0005046	KDEL sequence binding	IEP	Neighborhood
MF	GO:0005048	signal sequence binding	IEP	Neighborhood
CC	GO:0005615	extracellular space	IEP	Neighborhood
CC	GO:0005795	Golgi stack	IEP	Neighborhood
CC	GO:0005801	cis-Golgi network	IEP	Neighborhood
BP	GO:0006621	protein retention in ER lumen	IEP	Neighborhood
MF	GO:0008083	growth factor activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Neighborhood
MF	GO:0008825	cyclopropane-fatty-acyl-phospholipid synthase activity	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009828	plant-type cell wall loosening	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0009958	positive gravitropism	IEP	Neighborhood
BP	GO:0009969	xyloglucan biosynthetic process	IEP	Neighborhood
BP	GO:0010061	regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010063	positive regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010411	xyloglucan metabolic process	IEP	Neighborhood
BP	GO:0010453	regulation of cell fate commitment	IEP	Neighborhood
BP	GO:0010455	positive regulation of cell fate commitment	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
MF	GO:0030545	receptor regulator activity	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
BP	GO:0032507	maintenance of protein location in cell	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Neighborhood
BP	GO:0040034	regulation of development, heterochronic	IEP	Neighborhood
MF	GO:0042277	peptide binding	IEP	Neighborhood
BP	GO:0042343	indole glucosinolate metabolic process	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0042659	regulation of cell fate specification	IEP	Neighborhood
BP	GO:0042660	positive regulation of cell fate specification	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0045185	maintenance of protein location	IEP	Neighborhood
BP	GO:0045597	positive regulation of cell differentiation	IEP	Neighborhood
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	Neighborhood
BP	GO:0046685	response to arsenic-containing substance	IEP	Neighborhood
MF	GO:0046923	ER retention sequence binding	IEP	Neighborhood
MF	GO:0048018	receptor ligand activity	IEP	Neighborhood
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Neighborhood
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Neighborhood
BP	GO:0050982	detection of mechanical stimulus	IEP	Neighborhood
BP	GO:0051651	maintenance of location in cell	IEP	Neighborhood
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Neighborhood
BP	GO:1903888	regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1903890	positive regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905423	positive regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000012	regulation of auxin polar transport	IEP	Neighborhood
BP	GO:2000067	regulation of root morphogenesis	IEP	Neighborhood
BP	GO:2000280	regulation of root development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	20	62

External Links

No external refs found!

AT1G74500 (ATBS1, TMO7, BS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation