Cpa|evm.model.tig00000970.26

Description : Chromatin organisation.histones.H3-type histone

Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000970.26
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AT1G01370	HTR12, CENH3	Histone superfamily protein	0.02	Archaeplastida
MA_125055g0020	No alias	Histone H3.2 OS=Cichorium intybus (sp\|q5mya4\|h32_cicin : 122.0)	0.07	Archaeplastida
MA_159785g0010	No alias	Histone H3.2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Pp3c22_4790V3.1	No alias	Histone superfamily protein	0.01	Archaeplastida
Solyc01g095650.4.1	No alias	histone H3 variant (CENH3)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	5	114

External Links

No external refs found!