AT1G74620

Description : RING/U-box superfamily protein

Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0011376 (LandPlants) Phylogenetic Tree(s): OG_05_0011376_tree ,
OG_06_0023940 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G74620
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os02g58540.1	No alias	RING-H2-class E3 ligase	0.01	Archaeplastida
LOC_Os07g42610.1	No alias	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp....	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	183	225

External Links

No external refs found!

AT1G74620

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation