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  5. Cpa|evm.model.tig00000989.25

Cpa|evm.model.tig00000989.25


Description : CHD3-type chromatin-remodeling factor CHR7 OS=Arabidopsis thaliana


Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000989.25
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00216420 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.01 Archaeplastida
AMTR_s00111p00031560 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
AT4G31900 PKR2 chromatin remodeling factor, putative 0.02 Archaeplastida
LOC_Os06g14406.1 No alias Chromatin structure-remodeling complex protein SYD... 0.01 Archaeplastida
Pp3c1_25260V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c2_18470V3.1 No alias No annotation 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_N 728 812
IPR000330 SNF2_N 654 717
IPR023780 Chromo_domain 399 449
No external refs found!