Cpa|evm.model.tig00001003.33


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS30 component


Gene families : OG0003752 (Archaeplastida) Phylogenetic Tree(s): OG0003752_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001003.33
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00192320 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 Archaeplastida
AMTR_s00068p00064720 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 Archaeplastida
GSVIVT01016902001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Gb_23464 No alias component RPS30 of SSU proteome 0.2 Archaeplastida
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.15 Archaeplastida
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.21 Archaeplastida
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 Archaeplastida
Pp3c1_420V3.1 No alias Ribosomal protein S30 family protein 0.16 Archaeplastida
Pp3c2_28870V3.1 No alias Ribosomal protein S30 family protein 0.02 Archaeplastida
Pp3c2_29010V3.1 No alias Ribosomal protein S30 family protein 0.15 Archaeplastida
Pp3c7_26650V3.1 No alias Ribosomal protein S30 family protein 0.04 Archaeplastida
Smo227173 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Solyc08g076340.3.1 No alias component RPS30 of SSU proteome 0.06 Archaeplastida
Solyc12g008700.3.1 No alias component RPS30 of SSU proteome 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 70 127
IPR000626 Ubiquitin_dom 4 62
No external refs found!