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  5. Cpa|evm.model.tig00001029.19

Cpa|evm.model.tig00001029.19


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component


Gene families : OG0005566 (Archaeplastida) Phylogenetic Tree(s): OG0005566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001029.19
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT2G18510 emb2444 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 Archaeplastida
Cre06.g254800 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.06 Archaeplastida
MA_36129g0010 No alias component SF3B4 of splicing factor 3B complex 0.02 Archaeplastida
Mp1g06640.1 No alias component SF3B4 of splicing factor 3B complex 0.02 Archaeplastida
Solyc03g118800.3.1 No alias component SF3B4 of splicing factor 3B complex 0.02 Archaeplastida
Zm00001e004655_P002 No alias component SF3B4 of splicing factor 3B complex 0.03 Archaeplastida
Zm00001e012736_P002 No alias component SF3B4 of splicing factor 3B complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 81 151
IPR000504 RRM_dom 15 42
No external refs found!