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  5. Cpa|evm.model.tig00001042.14

Cpa|evm.model.tig00001042.14


Description : ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana


Gene families : OG0001589 (Archaeplastida) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001042.14
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00084950 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein At1g05910... 0.01 Archaeplastida
AT1G05910 No alias cell division cycle protein 48-related / CDC48-related 0.02 Archaeplastida
Cre01.g038151 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 Archaeplastida
GSVIVT01014274001 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 Archaeplastida
Gb_11471 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.01 Archaeplastida
LOC_Os01g47800.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp1g06470.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.01 Archaeplastida
Zm00001e020208_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 72 182
IPR001487 Bromodomain 510 554
No external refs found!