Cpa|evm.model.tig00001065.13

No description available

Gene families : OG0005856 (Archaeplastida) Phylogenetic Tree(s): OG0005856_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001065.13
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267030	evm_27.TU.AmTr_v1...	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida
LOC_Os08g32100.1	No alias	pre-mRNA splicing factor (RBM25)	0.02	Archaeplastida
MA_96952g0010	No alias	pre-mRNA splicing factor (RBM25)	0.01	Archaeplastida
Mp4g16880.1	No alias	pre-mRNA splicing factor (RBM25)	0.01	Archaeplastida
Pp3c16_19090V3.1	No alias	splicing factor PWI domain-containing protein / RNA...	0.04	Archaeplastida
Pp3c25_3310V3.1	No alias	splicing factor PWI domain-containing protein / RNA...	0.04	Archaeplastida
Smo440812	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.03	Archaeplastida
Zm00001e004229_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida
Zm00001e022382_P002	No alias	pre-mRNA splicing factor (RBM25)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002483	PWI_dom	400	455

External Links

No external refs found!