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  5. Cpa|evm.model.tig00001107.12

Cpa|evm.model.tig00001107.12


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component


Gene families : OG0003982 (Archaeplastida) Phylogenetic Tree(s): OG0003982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001107.12
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268610 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.01 Archaeplastida
AT1G60170 emb1220 pre-mRNA processing ribonucleoprotein binding... 0.02 Archaeplastida
Cre10.g424850 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
GSVIVT01020223001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019175 Prp31_C 360 475
IPR002687 Nop_dom 124 351
No external refs found!