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  5. Cpa|evm.model.tig00001107.13

Cpa|evm.model.tig00001107.13


Description : Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6)


Gene families : OG0002611 (Archaeplastida) Phylogenetic Tree(s): OG0002611_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001107.13
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT5G02310 PRT6 proteolysis 6 0.02 Archaeplastida
GSVIVT01034167001 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_387g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.02 Archaeplastida
MA_767141g0010 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Mp7g16320.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.01 Archaeplastida
Pp3c10_20380V3.1 No alias proteolysis 6 0.01 Archaeplastida
Pp3c17_2850V3.1 No alias proteolysis 6 0.02 Archaeplastida
Pp3c3_24510V3.1 No alias proteolysis 6 0.02 Archaeplastida
Pp3c9_4700V3.1 No alias proteolysis 6 0.03 Archaeplastida
Solyc09g010830.4.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.01 Archaeplastida
Zm00001e016914_P004 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003126 Znf_UBR 8 68
No external refs found!