Cpa|evm.model.tig00001107.20

Description : RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii

Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001107.20
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00080200	evm_27.TU.AmTr_v1...	External stimuli response.temperature.Hsp...	0.02	Archaeplastida
AMTR_s00062p00185880	evm_27.TU.AmTr_v1...	External stimuli response.temperature.Hsp...	0.01	Archaeplastida
AMTR_s00106p00119930	evm_27.TU.AmTr_v1...	External stimuli response.temperature.Hsp...	0.01	Archaeplastida
AT5G18820	EMB3007	TCP-1/cpn60 chaperonin family protein	0.02	Archaeplastida
GSVIVT01031526001	No alias	External stimuli response.temperature.Hsp...	0.01	Archaeplastida
Gb_25193	No alias	RuBisCO large subunit-binding protein subunit beta,...	0.02	Archaeplastida
LOC_Os06g02380.2	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	Archaeplastida
MA_542957g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.01	Archaeplastida
Pp3c16_4660V3.1	No alias	chaperonin 60 beta	0.02	Archaeplastida
Pp3c6_20400V3.1	No alias	chaperonin 60 beta	0.01	Archaeplastida
Smo165043	No alias	External stimuli response.temperature.Hsp...	0.01	Archaeplastida
Zm00001e001025_P002	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.01	Archaeplastida
Zm00001e004641_P001	No alias	chaperone (Hsp60)	0.01	Archaeplastida
Zm00001e031536_P001	No alias	subunit alpha of Cpn60 chaperonin complex. component...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	18	476

External Links

No external refs found!