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  5. Cpa|evm.model.tig00001130.5

Cpa|evm.model.tig00001130.5


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase


Gene families : OG0001405 (Archaeplastida) Phylogenetic Tree(s): OG0001405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001130.5
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00143390 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
AMTR_s00038p00088230 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
AT5G16715 EMB2247 ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.01 Archaeplastida
Cre07.g350500 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cre12.g537100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Gb_39267 No alias valine-tRNA ligase 0.01 Archaeplastida
LOC_Os03g02100.1 No alias valine-tRNA ligase 0.04 Archaeplastida
LOC_Os03g48850.1 No alias valine-tRNA ligase 0.01 Archaeplastida
Mp4g09690.1 No alias valine-tRNA ligase 0.02 Archaeplastida
Pp3c12_13790V3.1 No alias ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.01 Archaeplastida
Pp3c2_9830V3.1 No alias valyl-tRNA synthetase / valine--tRNA ligase (VALRS) 0.02 Archaeplastida
Smo141956 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
Solyc09g007540.3.1 No alias valine-tRNA ligase 0.02 Archaeplastida
Solyc12g019100.2.1 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.02 Archaeplastida
Solyc12g019110.3.1 No alias valine-tRNA ligase 0.01 Archaeplastida
Zm00001e010301_P002 No alias valine-tRNA ligase 0.01 Archaeplastida
Zm00001e011483_P001 No alias valine-tRNA ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 642 773
IPR002300 aa-tRNA-synth_Ia 29 597
No external refs found!