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  5. Cpa|evm.model.tig00001164.6

Cpa|evm.model.tig00001164.6


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL30 component


Gene families : OG0002142 (Archaeplastida) Phylogenetic Tree(s): OG0002142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001164.6
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00066400 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
AT1G77940 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.15 Archaeplastida
AT3G18740 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.14 Archaeplastida
Cre10.g420750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01022191001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01032102001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
Gb_02409 No alias component RPL30 of LSU proteome component 0.14 Archaeplastida
Gb_13527 No alias component RPL30 of LSU proteome component 0.05 Archaeplastida
LOC_Os01g16890.1 No alias component RPL30 of LSU proteome component 0.12 Archaeplastida
LOC_Os01g59730.1 No alias component RPL30 of LSU proteome component 0.04 Archaeplastida
LOC_Os05g41110.1 No alias component RPL30 of LSU proteome component 0.08 Archaeplastida
MA_10431626g0010 No alias component RPL30 of LSU proteome component 0.02 Archaeplastida
MA_6354g0010 No alias component RPL30 of LSU proteome component 0.1 Archaeplastida
Mp7g01690.1 No alias component RPL30 of LSU proteome component 0.18 Archaeplastida
Pp3c12_9290V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.12 Archaeplastida
Pp3c16_10400V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.1 Archaeplastida
Pp3c25_9320V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 Archaeplastida
Pp3c4_15480V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.12 Archaeplastida
Pp3c5_4330V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.19 Archaeplastida
Smo19071 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Solyc01g009100.4.1 No alias component RPL30 of LSU proteome component 0.13 Archaeplastida
Solyc04g072660.4.1 No alias component RPL30 of LSU proteome component 0.11 Archaeplastida
Solyc11g071490.2.1 No alias component RPL30 of LSU proteome component 0.2 Archaeplastida
Zm00001e013242_P001 No alias component RPL30 of LSU proteome component 0.04 Archaeplastida
Zm00001e025492_P001 No alias component RPL30 of LSU proteome component 0.13 Archaeplastida
Zm00001e031987_P001 No alias component RPL30 of LSU proteome component 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 32 128
No external refs found!